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Flex2 said..
Shor, for sure I am super interested if you can get long term water proof 3D print housing. Like you I can print something that seems to be water resistant and can pass the bucket test for 24hrs no problem. I printed around 20 cases trying to achieve 'water proof'. Take it into the real world for a few days of rain and submersion and there is condensation showing inside the case and pretty soon after that the electronics start doing weird stuff. Its not big time leaking but for sure moisture is getting in. (you can also take this moisture out via sitting in a bag of rice etc). If you do manage to pull it off, many will be interested to know the basics like material, layer height, # perimeters, seam position, over extrusion/over temp amount, any post processing like annealing or other tricks etc. Maybe your way of having a removable lid to then allow the insides to dry after each session is the best approach.
I'd try to give the "painting" the inside and/or outside of the housing with epoxy a shot. Something like West Marine's G/flex epoxy that is specifically made for water proofing applications might work (I'd take the name as a further hint

).
If the problem is just a bit of condensation, and the case can be opened easily, try the anti-fog inserts for GoPro. They work quite well and are reusable after drying them in a oven. The GoPro dive housings are generally fully water proof, but every now and then, a bit of sand on the sail can make water creep in, and inserts are quite wet after a session, but the footage is still great.
I've also had some success with silicon coating to waterproof "IPX7" bluetooth headphones which have visible holes. I followed the instructions at
www.instructables.com/How-to-Waterproof-Electronics/ to coat the electronics on the inside, and the head phones survived crashes that would have killed them without the coating. Quick and easy, and may prevent some of the "weird stuff" from happening.