A few points, i should point out (Incase your not aware) I'm a boat yard, so i have a little experience. IM not saying i have all the answers but i can only tell it as I see it..
The CNC boats actually IMHO look okay, their is a guy in Two rocks who build them and sells bare hull and i've fitted a few hin numbers for him and i was rather impressed at the design, use of space and general lay out. I have climbed all over the 6.1 and that was maybe my fav. I recently sold a 7.5 that was completed and it was a huge hit. Sold very fast and water tested went very well also. I thought the actual welding on the boat sold to be first class and that will make a big difference when coming to sell on later. People were sceptical of it being a "Not so well known" brand but once they all viewed the finished product, were disappointed to have missed out.
So having said that, you would need to do a good job at welding. The welds must be clean and flowing. If not your throwing good money away. As the video above of Busters Bro, id suggest if you enjoy that sort of thing, it would be very enjoyable. Kind of like surfing a board you built for yourself.
You will be able to make individual changes specific to your like and dislikes.
The cost involved won't be as cheap if you make a few mistakes. Once you've got it nailed i think you'll find it cheaper, even though much of the fit out needs to be purchased at higher rates. The labour content in building a hull from scratch is high, so you should have some reasonable savings IMHO.
You do need to have the time and energy though also. Remember the time must come from somewhere, plus the space that will be required. A project like this really would be hard in a confined space.
With a CNC they come with all the specs and builders plate which is good, but you as the welder (Builder) will be responsible for that boat for its life time. Same as if you import a boat directly from overseas, your also responsible, as the importer.
You may have a little fun with insurance, but not too hard if you ask the right people. Finance didn't seem to be an issue for a CNC boat.
Hopefully that helps some.